GenomeWideIdentificationofTranscriptionFactorBindingSitesin...
Genome-Wide Identification of Transcription Factor-Binding Sites in Plants Using Chromatin Immunoprecipitation Followed by Microarray (ChIP-chip) or Sequencing (ChIP-seq)Nearly all signal transduction pathways lead to regulation of gene expression by controlling specific transcription factors (TFs). Chromatin immunoprecipitation (ChIP) is a powerful method for studying TF–DNA interactions in vivo. To identi......阅读全文
GenomeWide－Identification－of－Transcription－FactorBinding－Sites－in...
Genome-Wide Identification of Transcription Factor-Binding Sites in Plants Using Chromatin Immunoprecipitation Followed by Microarray (ChIP-chip)
软件：Genomewide－Association－Study－Software
The software included are listed bellow IMPUTEa program for genotype imputation in genome-wide association studies and fine-mapping studies based on a
An－Integrative－Procedure－for－Apoptosis－Identification－and－Measurement
IntroductionApoptosis is a normal physiological phenomenon put forward by Kerr [1]. It plays an important role in embryonic development, maintenance o
a－pipeline－for－the－identification－of－intact－Nglycopeptides（六）
Figure 4. Comparison of different decoy strategies. The estimated FDR of each decoy method is compared with the real FDR. “Decoy: + 11” means in
a－pipeline－for－the－identification－of－intact－Nglycopeptides（三）
Figure 1. The overall workflow of pGlyco. First the sample is analyzed by HCD-MS/MS (NCE = 40%).Then the product-dependent CID-MS/MS and data-depend
a－pipeline－for－the－identification－of－intact－Nglycopeptides（一）
pGlyco: a pipeline for the identification of intact N-glycopeptides by using HCDand CID-MS/MS and MS3 Wen-Feng Zeng1,2,*, Ming-Qi Liu3,*, Yang Zhang3,
a－pipeline－for－the－identification－of－intact－Nglycopeptides（四）
Interpretation of MS3 data. MS3 data were converted to “.ms3” format by pXtract within pFind Studio (version 2.8)26,27, and then analyzed by pFind
a－pipeline－for－the－identification－of－intact－Nglycopeptides（二）
Methods Materials. A uniform mixture of six standard glycoproteins was used as the starting material, including IgG (56834, catalog numeber), IgA
A－Yeast－Secretion－Trap－Assay－for－Identification－of－Secreted－Proteins－...
Secreted proteins from plants and phytopathogens play important roles in their interactions and contribute to elaborate mechanisms of attack, defe
An－Integrative－Procedure－for－Apoptosis－Identification－and－Measurement2
TroubleshootingCritical Steps(1) Don’t trypsinize cells for too long when collecting them.(2) Rotation speed should be no more than 1500 rpm during ce
a－pipeline－for－the－identification－of－intact－Nglycopeptides（七）
Complementary ion information provided by HCD- and CID-MS/MS. Both HCD- and CID-MS/MScould be used to optimize the glycopeptide identification. Rece
a－pipeline－for－the－identification－of－intact－Nglycopeptides（五）
Alignment between MS/MS and MS3 identifications. Glycans were identified after analyzing the HCD/CID-MS/MS spectrum pairs, but the sequences of pe
Identification－and－expansion－of－the－tumorigenic－lung－cancer－stem－cell－...
Identification and expansion of the tumorigenic lung cancer stem cell populationLung cancer contains a rare population of CD133+ cancer stem-like ce
Identification－of－a－Mutant－Kinase/ATP－Analog－Pair1
Identification of a Mutant Kinase/ATP Analog PairScott T. Eblen, N. Vinay Kumar, and Michael J. WeberDepartment of Microbiology and Cancer Center, Uni
Identification－of－a－Mutant－Kinase/ATP－Analog－Pair2
Cellular Transfection and Immunoprecipitation Before proceeding with the experiments outlined below, all kinase pocket mutants should be characterize
Comprehensive－identification－of－novel－proteins－and－Nglycosylation－sites四
Figure 2 Distribution of N-glycopeptides analyzed by different enriched methods and instruments of royal jelly proteins. A is the distribution of N-
Comprehensive－identification－of－novel－proteins－and－Nglycosylation－sites八
References1. Fujita T, Kozuka-Hata H, Ao-Kondo H, Kunieda T, Oyama M, Kubo T: Proteomic analysis of the royal jelly and characterization of the fu
Comprehensive－identification－of－novel－proteins－and－Nglycosylation－sites七
Data analysisTandem mass spectra were retrieved using Xcalibur (version 2.2, Thermo Fisher Scientific) and AnalystTF (version 1.6, AB SCIEX) softw
Comprehensive－identification－of－novel－proteins－and－Nglycosylation－sites五
RJ provides efficient energetic fuels for the fast development of larvae and the egg-laying queen through the metabolism of sugars, lipids, and pr
Comprehensive－identification－of－novel－proteins－and－Nglycosylation－sites九
41. Schmidt O, Theopold U, Strand M: Innate immunity and its evasion and suppression by hymenopteran endoparasitoids. BioEssays 2001, 23(4):344–35
Comprehensive－identification－of－novel－proteins－and－Nglycosylation－sites三
Note: All of the identified proteins are from Apis mellifera. Accession is the unique number given to mark the entry of a protein in the database
Comprehensive－identification－of－novel－proteins－and－Nglycosylation－sites六
N-glycosylation modification of proteins has reported to improve the health of living organisms through antibacterial activity [68], antioxidant a
Comprehensive－identification－of－novel－proteins－and－Nglycosylation－sites一
Comprehensive identification of novel proteins and N-glycosylation sites in royal jellyLan Zhang1,2†, Bin Han1†, Rongli Li1, Xiaoshan Lu1,3, Aiying Ni
Comprehensive－identification－of－novel－proteins－and－Nglycosylation－sites二
ResultsIdentified novel royal jelly proteins To expand the number of known proteins in the RJ proteome, RJ proteins were extracted and digested wit
BMC－Plant－Biology测序鉴定铝胁迫下野生大豆miRNA及其靶基因
野生大豆（Glycine soja）是世界上种植面积最广的作物之一。相比于栽培大豆，野生大豆能够更好地适应自然环境的胁迫如干旱，碱，盐胁迫。对野生大豆的性状进行系统研究，将有助于栽培大豆的遗传改良。近日，华南农业大学亚热带农业生物资源保护与利用国家重点实验室年海教授领衔的课题组联合使用第二代高通
二代测序鉴定铝胁迫下野生大豆miRNA及其靶基因
野生大豆（Glycine soja）是世界上种植面积最广的作物之一。相比于栽培大豆，野生大豆能够更好地适应自然环境的胁迫如干旱，碱，盐胁迫。对野生大豆的性状进行系统研究，将有助于栽培大豆的遗传改良。近日，华南农业大学亚热带农业生物资源保护与利用国家重点实验室年海教授领衔的课题组联合使用第二代高通量测
水生所四膜虫多基因家族分子进化研究取得新进展
BMC evolutionary biology杂志10月27日在线发表了中国科学院水生生物研究所原生动物功能基因组学学科组博士生熊杰完成的题为Genome-wide identification and evolution of ATP-binding cassette tran
分子植物卓越中心等在甘薯多倍体遗传定位研究中获进展
近日，中国科学院分子植物科学卓越创新中心与上海师范大学、中国林业科学研究院等多家单位合作在Molecular Plant上发表题为Genome-wide identification of agronomically important genes in outcrossing crops us
有关梅花垂枝性状遗传的调控研究获进展
梅花（Prunus mume ）是我国特有早春木本观赏植物，素有“花魁”之美誉。垂枝梅因其枝条自然下垂、树姿隽秀、花开如瀑，深受人们喜爱。然而，垂枝梅花品种资源稀缺，垂枝性状遗传机理仍不清晰，极大地限制了垂枝梅花新品种选育进程及其在园林景观中的广泛应用，垂枝性状分子标记辅助选择育种和遗传机制的解
上海辰山植物园在分子进化研究方面取得新进展
3月3日，国际学术期刊BMC Genomics 在线发表了上海辰山植物园（中国科学院上海辰山植物科学研究中心）植物抗逆与分子进化研究组题为Genome-wide identification and evolutionary analyses of the PP2C gene family wi